BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B12LP1|AL427275
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1939 0.0
3x_Contig1722 197 5e-50
3x_Contig1521 195 2e-49
3x_Contig1717 175 2e-43
3x_Contig939 169 1e-41
3x_Contig631 157 4e-38
>3x_Contig1675
Length = 13954
Score = 1939 bits (977), Expect = 0.0
Identities = 990/995 (99%)
Strand = Plus / Minus
Query: 1 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4291 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 4232
Query: 61 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4231 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 4172
Query: 121 cacgtgacatgtatagttacatatcacaacacatcatgaagattaccggaatacaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4171 cacgtgacatgtatagttacatatcacaacacatcatgaagattaccggaatacaaaagg 4112
Query: 181 gtcgccaacataattttgggtcacgtgtaagaaagtatcggtcttacccggtccgagtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4111 gtcgccaacataattttgggtcacgtgtaagaaagtatcggtcttacccggtccgagtaa 4052
Query: 241 ttcaacgagtgttcccgtttctgcattcgccagttagcagacccataacatacagcaggg 300
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4051 ttcaacgagtgtacccgtttctgcattcgccagtaagcagacccataacatacagcaggg 3992
Query: 301 tagaacaactcgccttgtgggacttgtgggtgtwatcaaatatccctaatatgaacagag 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3991 tagaacaactcgccttgtgggacttgtgggtgtaatcaaatatccctaatatgaacagag 3932
Query: 361 taaagtactatgactaaatcttttttttttcttgcggccggcattgcttctcggtatcgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3931 taaagtactatgactaaatcttttttttttcttgcggccggcattgcttctcggtatcgc 3872
Query: 421 aacaataatacctactgactttttcaaattattaatgaattctggattttgatgtatata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3871 aacaataatacctactgactttttcaaattattaatgaattctggattttgatgtatata 3812
Query: 481 tataaagtaagaagttcacattgctgatatttcaagacattttctgtgcgattagcgaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3811 tataaagtaagaagttcacattgctgatatttcaagacattttctgtgcgattagcgaga 3752
Query: 541 cagttaatagttattggtcgatcttgtttctatcattaaccgttttatttatcagccatc 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3751 cagtgaatagttattggtcgatcttgtttctatcattaaccgttttatttatcagccatc 3692
Query: 601 aaccacaattacaatacatctttcaaaaatgccaagtgccgcaacaatcgctcgtgtcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3691 aaccacaattacaatacatctttcaaaaatgccaagtgccgcaacaatcgctcgtgtcca 3632
Query: 661 aggtttaatcaactcatctaagatctttgtcgcttcaaagacatactgtccatactgcca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3631 aggtttaatcaactcatctaagatctttgtcgcttcaaagacatactgtccatactgcca 3572
Query: 721 agccactttgaaaactttgtttgaagaaaagaaggtggacaaaaagttggctactgtttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3571 agccactttgaaaactttgtttgaagaaaagaaggtggacaaaaagttggctactgtttt 3512
Query: 781 gcaattgaaccaactagaagatggttccgatattcaggatgctttggcagaaattaccgg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3511 gcaattgaaccaactagaagatggttccgatattcaggatgctttggcagaaattaccgg 3452
Query: 841 ccaaaagactgttccaaacatctttattaatggcaagcacatcggtggtaactctgattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3451 ccaaaagactgttccaaacatctttattaatggcaagcacatcggtggtaactctgattt 3392
Query: 901 gcaagagttgaacaactccggtgatttggataagttgttggcttccttataaagttgaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3391 gcaagagttgaacaactccggtgatttggataagttgttggcttccttataaagttgaat 3332
Query: 961 tttctcaagcagcctcatattagctggatagattt 995
||||||||||||| |||||||||||||||||||||
Sbjct: 3331 tttctcaagcagcttcatattagctggatagattt 3297
>3x_Contig1722
Length = 17718
Score = 197 bits (99), Expect = 5e-50
Identities = 138/151 (91%)
Strand = Plus / Plus
Query: 1 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 60
|||||||||||||| ||| ||||||| | |||| ||||||||||| ||||||||| | |
Sbjct: 2314 gatctaatctactaattagtaggaatcagatctacagacaccaggtgcatctaattattc 2373
Query: 61 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 120
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2374 taggagatatatagctaatcaagatggattcttctaataaagatctgataagatcaaagc 2433
Query: 121 cacgtgacatgtatagttacatatcacaaca 151
||||||||||||||||| ||||| |||||||
Sbjct: 2434 cacgtgacatgtatagtcacataccacaaca 2464
>3x_Contig1521
Length = 8057
Score = 195 bits (98), Expect = 2e-49
Identities = 137/150 (91%)
Strand = Plus / Minus
Query: 1 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 60
|||||||||||||| ||| ||||||| | |||| ||||||||||| ||||||||| | |
Sbjct: 4485 gatctaatctactaattagtaggaatcagatctacagacaccaggtgcatctaattattc 4426
Query: 61 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 120
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4425 taggagatatatagctaatcaagatggattcttctaataaagatctgataagatcaaagc 4366
Query: 121 cacgtgacatgtatagttacatatcacaac 150
||||||||||||||||| ||||| ||||||
Sbjct: 4365 cacgtgacatgtatagtcacataacacaac 4336
>3x_Contig1717
Length = 18389
Score = 175 bits (88), Expect = 2e-43
Identities = 136/152 (89%)
Strand = Plus / Minus
Query: 1 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 60
|||||||||||||| ||| |||| || | |||| |||||| |||| ||||||||| |||
Sbjct: 1537 gatctaatctactaattagtagggatcagatctaaagacactaggtgcatctaattatac 1478
Query: 61 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 120
|||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1477 taggagatatatagctaatcaagatggattcttctaataaagatctgacaagatcaaagc 1418
Query: 121 cacgtgacatgtatagttacatatcacaacac 152
||||||||||||||||| ||||| | ||||||
Sbjct: 1417 cacgtgacatgtatagtcacataccgcaacac 1386
>3x_Contig939
Length = 3877
Score = 169 bits (85), Expect = 1e-41
Identities = 106/113 (93%)
Strand = Plus / Minus
Query: 31 tctagagacaccaggtacatctaattctactaggaggtatatagctgatcaagatggatt 90
|||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 2376 tctagagacaccaggtgcatctaattctactaggatatatatagctaatcaagatggatt 2317
Query: 91 cttctaataaagatctgataagatcaaagccacgtgacatgtatagttacata 143
|||||||||||||||||| |||||| ||||||||||||||||||||| |||||
Sbjct: 2316 cttctaataaagatctgacaagatctaagccacgtgacatgtatagtcacata 2264
>3x_Contig631
Length = 2339
Score = 157 bits (79), Expect = 4e-38
Identities = 133/151 (88%)
Strand = Plus / Plus
Query: 1 gatctaatctactagttattaggaattgggtctagagacaccaggtacatctaattctac 60
|||||||||||||| ||| |||| || | |||| ||||||||||| |||||||||||||
Sbjct: 1253 gatctaatctactaattagtagggatcagatctacagacaccaggtgcatctaattctac 1312
Query: 61 taggaggtatatagctgatcaagatggattcttctaataaagatctgataagatcaaagc 120
|||||| || |||||| ||||||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 1313 taggagatagatagctaatcaagatgaattcttctaataaagatctgacaagatctaagc 1372
Query: 121 cacgtgacatgtatagttacatatcacaaca 151
||||||||||||| ||| | ||| |||||||
Sbjct: 1373 cacgtgacatgtacagtcatataccacaaca 1403
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9588
Number of Sequences: 1807
Number of extensions: 9588
Number of successful extensions: 87
Number of sequences better than 1.0e-20: 6
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)